Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CDH16O75309 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH16O75309 NKILA-202ENST00000614771 2598 ntBASIC18.34■□□□□ 0.53
CDH16O75309 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 ABHD17AP1-201ENST00000358206 933 ntBASIC18.34■□□□□ 0.53
CDH16O75309 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CDH16O75309 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CDH16O75309 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.34■□□□□ 0.53
CDH16O75309 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CDH16O75309 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDH16O75309 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH16O75309 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH16O75309 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 AL121761.2-201ENST00000598007 1648 ntBASIC18.34■□□□□ 0.53
CDH16O75309 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH16O75309 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH16O75309 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH16O75309 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH16O75309 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CDH16O75309 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH16O75309 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH16O75309 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDH16O75309 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH16O75309 MIR4651-201ENST00000582622 73 ntBASIC18.33■□□□□ 0.52
CDH16O75309 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH16O75309 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH16O75309 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.33■□□□□ 0.52
CDH16O75309 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDH16O75309 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH16O75309 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CDH16O75309 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 AC011676.5-201ENST00000624864 2660 ntBASIC18.32■□□□□ 0.52
CDH16O75309 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 KRT18P29-201ENST00000397031 1267 ntBASIC18.32■□□□□ 0.52
CDH16O75309 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.32■□□□□ 0.52
CDH16O75309 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 TMEM191A-211ENST00000637163 1067 ntBASIC18.32■□□□□ 0.52
CDH16O75309 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH16O75309 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH16O75309 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH16O75309 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CDH16O75309 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH16O75309 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH16O75309 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH16O75309 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms