Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CPNE3O75131 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CPNE3O75131 TOB2P1-201ENST00000469761 992 ntBASIC17.41■□□□□ 0.38
CPNE3O75131 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE3O75131 AP000867.3-201ENST00000524675 377 ntBASIC17.41■□□□□ 0.38
CPNE3O75131 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE3O75131 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE3O75131 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE3O75131 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE3O75131 PCDHB18P-201ENST00000524813 2368 ntBASIC17.41■□□□□ 0.38
CPNE3O75131 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE3O75131 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CPNE3O75131 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 AL163051.1-201ENST00000569214 1512 ntBASIC17.41■□□□□ 0.38
CPNE3O75131 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE3O75131 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 AC018470.1-201ENST00000624790 3129 ntBASIC17.41■□□□□ 0.38
CPNE3O75131 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CPNE3O75131 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE3O75131 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CPNE3O75131 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE3O75131 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE3O75131 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE3O75131 AC012615.1-201ENST00000565797 1299 ntBASIC17.4■□□□□ 0.38
CPNE3O75131 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE3O75131 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CPNE3O75131 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE3O75131 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE3O75131 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.4■□□□□ 0.38
CPNE3O75131 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE3O75131 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE3O75131 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE3O75131 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CPNE3O75131 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CPNE3O75131 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 GUSBP12-201ENST00000513727 720 ntBASIC17.39■□□□□ 0.37
CPNE3O75131 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE3O75131 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CPNE3O75131 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CPNE3O75131 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CPNE3O75131 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE3O75131 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE3O75131 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE3O75131 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE3O75131 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE3O75131 MIR149-201ENST00000384879 89 ntBASIC17.38■□□□□ 0.37
CPNE3O75131 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CPNE3O75131 AC026396.1-201ENST00000419388 421 ntBASIC17.38■□□□□ 0.37
CPNE3O75131 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.38■□□□□ 0.37
CPNE3O75131 AC008687.5-201ENST00000593746 558 ntBASIC17.38■□□□□ 0.37
CPNE3O75131 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE3O75131 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms