Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PFDN1O60925 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PFDN1O60925 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.22■□□□□ 0.19
PFDN1O60925 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.22■□□□□ 0.19
PFDN1O60925 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.22■□□□□ 0.19
PFDN1O60925 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.22■□□□□ 0.19
PFDN1O60925 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.22■□□□□ 0.19
PFDN1O60925 PVT1_1.1-201ENST00000615125 194 ntBASIC16.22■□□□□ 0.19
PFDN1O60925 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PFDN1O60925 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 AP002414.2-201ENST00000591780 3365 ntBASIC16.22■□□□□ 0.19
PFDN1O60925 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.22■□□□□ 0.19
PFDN1O60925 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PFDN1O60925 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 AL513523.2-202ENST00000427283 2040 ntBASIC16.21■□□□□ 0.19
PFDN1O60925 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.21■□□□□ 0.19
PFDN1O60925 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.21■□□□□ 0.19
PFDN1O60925 KRT18P60-201ENST00000312876 1297 ntBASIC16.21■□□□□ 0.19
PFDN1O60925 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PFDN1O60925 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.21■□□□□ 0.19
PFDN1O60925 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN1O60925 CICP4-201ENST00000447359 2812 ntBASIC16.21■□□□□ 0.19
PFDN1O60925 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PFDN1O60925 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PFDN1O60925 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
PFDN1O60925 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.21■□□□□ 0.18
PFDN1O60925 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.21■□□□□ 0.18
PFDN1O60925 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN1O60925 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PFDN1O60925 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.2■□□□□ 0.18
PFDN1O60925 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PFDN1O60925 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN1O60925 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
PFDN1O60925 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PFDN1O60925 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.2■□□□□ 0.18
PFDN1O60925 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PFDN1O60925 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN1O60925 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
PFDN1O60925 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN1O60925 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms