Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.11■□□□□ 0.33
URB1O60287 AC105339.3-201ENST00000560043 636 ntBASIC17.11■□□□□ 0.33
URB1O60287 AC011467.4-201ENST00000594891 528 ntBASIC17.11■□□□□ 0.33
URB1O60287 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
URB1O60287 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
URB1O60287 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.11■□□□□ 0.33
URB1O60287 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
URB1O60287 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.11■□□□□ 0.33
URB1O60287 AC138932.1-201ENST00000534164 6830 ntBASIC17.11■□□□□ 0.33
URB1O60287 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
URB1O60287 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.11■□□□□ 0.33
URB1O60287 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.11■□□□□ 0.33
URB1O60287 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.1■□□□□ 0.33
URB1O60287 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 CLDN5-201ENST00000403084 2357 ntBASIC17.1■□□□□ 0.33
URB1O60287 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 INTS4P1-201ENST00000438455 1935 ntBASIC17.1■□□□□ 0.33
URB1O60287 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
URB1O60287 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.1■□□□□ 0.33
URB1O60287 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 HLA-J-203ENST00000494367 1087 ntBASIC17.1■□□□□ 0.33
URB1O60287 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
URB1O60287 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
URB1O60287 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.1■□□□□ 0.33
URB1O60287 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
URB1O60287 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.09■□□□□ 0.33
URB1O60287 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.09■□□□□ 0.33
URB1O60287 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.09■□□□□ 0.33
URB1O60287 MIR770-201ENST00000390219 98 ntBASIC17.09■□□□□ 0.33
URB1O60287 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 AC009533.2-201ENST00000543664 586 ntBASIC17.09■□□□□ 0.33
URB1O60287 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.09■□□□□ 0.33
URB1O60287 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
URB1O60287 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
URB1O60287 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
URB1O60287 AL158211.5-201ENST00000623583 2518 ntBASIC17.09■□□□□ 0.33
URB1O60287 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
URB1O60287 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.09■□□□□ 0.33
URB1O60287 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.09■□□□□ 0.33
URB1O60287 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.09■□□□□ 0.33
URB1O60287 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
URB1O60287 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
URB1O60287 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
URB1O60287 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
URB1O60287 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.08■□□□□ 0.33
URB1O60287 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
URB1O60287 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
URB1O60287 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
URB1O60287 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms