Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.03■□□□□ 0.32
FOXS1O43638 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.03■□□□□ 0.32
FOXS1O43638 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXS1O43638 AC074051.2-201ENST00000565115 352 ntBASIC17.03■□□□□ 0.32
FOXS1O43638 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.03■□□□□ 0.32
FOXS1O43638 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXS1O43638 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXS1O43638 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
FOXS1O43638 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXS1O43638 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 REXO1L9P-201ENST00000604264 2108 ntBASIC17.02■□□□□ 0.32
FOXS1O43638 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXS1O43638 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FOXS1O43638 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
FOXS1O43638 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXS1O43638 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXS1O43638 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXS1O43638 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXS1O43638 VENTXP7-201ENST00000475503 772 ntBASIC17.02■□□□□ 0.32
FOXS1O43638 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXS1O43638 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXS1O43638 AC005336.2-201ENST00000593183 939 ntBASIC17.02■□□□□ 0.32
FOXS1O43638 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXS1O43638 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXS1O43638 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXS1O43638 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.02■□□□□ 0.31
FOXS1O43638 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.02■□□□□ 0.31
FOXS1O43638 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.02■□□□□ 0.31
FOXS1O43638 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXS1O43638 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.02■□□□□ 0.31
FOXS1O43638 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
FOXS1O43638 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 NSUN5P1-202ENST00000421140 1535 ntBASIC17.01■□□□□ 0.31
FOXS1O43638 NSUN5P2-203ENST00000457352 1529 ntBASIC17.01■□□□□ 0.31
FOXS1O43638 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 RNF165-205ENST00000588679 2904 ntBASIC17.01■□□□□ 0.31
FOXS1O43638 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXS1O43638 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXS1O43638 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXS1O43638 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXS1O43638 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXS1O43638 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FOXS1O43638 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXS1O43638 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXS1O43638 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXS1O43638 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXS1O43638 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXS1O43638 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXS1O43638 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXS1O43638 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXS1O43638 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXS1O43638 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXS1O43638 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
FOXS1O43638 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXS1O43638 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17■□□□□ 0.31
FOXS1O43638 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17■□□□□ 0.31
FOXS1O43638 PRELID1P1-202ENST00000567272 903 ntBASIC17■□□□□ 0.31
FOXS1O43638 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXS1O43638 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms