Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.78■□□□□ 0.12
XRCC2O43543 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.78■□□□□ 0.12
XRCC2O43543 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 NOC2LP2-201ENST00000407594 1944 ntBASIC15.78■□□□□ 0.12
XRCC2O43543 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
XRCC2O43543 AC099343.3-201ENST00000605834 2503 ntBASIC15.77■□□□□ 0.12
XRCC2O43543 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.77■□□□□ 0.12
XRCC2O43543 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
XRCC2O43543 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
XRCC2O43543 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 AC093010.1-201ENST00000473625 1624 ntBASIC15.77■□□□□ 0.12
XRCC2O43543 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.77■□□□□ 0.12
XRCC2O43543 ATP5G1P1-201ENST00000448724 379 ntBASIC15.77■□□□□ 0.12
XRCC2O43543 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC2O43543 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.77■□□□□ 0.12
XRCC2O43543 AC073912.3-201ENST00000624414 853 ntBASIC15.77■□□□□ 0.12
XRCC2O43543 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC2O43543 AL024508.2-201ENST00000607749 1894 ntBASIC15.77■□□□□ 0.11
XRCC2O43543 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
XRCC2O43543 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC2O43543 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC2O43543 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC2O43543 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.77■□□□□ 0.11
XRCC2O43543 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
XRCC2O43543 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC2O43543 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC2O43543 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC2O43543 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
XRCC2O43543 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 PKD1P1-201ENST00000458669 6805 ntBASIC15.76■□□□□ 0.11
XRCC2O43543 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
XRCC2O43543 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
XRCC2O43543 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.76■□□□□ 0.11
XRCC2O43543 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.76■□□□□ 0.11
XRCC2O43543 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
XRCC2O43543 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
XRCC2O43543 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 AL031432.5-201ENST00000641059 760 ntBASIC15.76■□□□□ 0.11
XRCC2O43543 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
XRCC2O43543 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC2O43543 LINC01126-201ENST00000623515 1646 ntBASIC15.76■□□□□ 0.11
XRCC2O43543 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.75■□□□□ 0.11
XRCC2O43543 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms