Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXA2O43364 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.34■□□□□ 0.69
HOXA2O43364 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXA2O43364 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA2O43364 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXA2O43364 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA2O43364 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA2O43364 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA2O43364 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA2O43364 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA2O43364 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXA2O43364 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXA2O43364 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
HOXA2O43364 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA2O43364 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXA2O43364 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HOXA2O43364 RPS2P1-201ENST00000434010 821 ntBASIC19.33■□□□□ 0.68
HOXA2O43364 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXA2O43364 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA2O43364 AC145285.3-201ENST00000564603 959 ntBASIC19.33■□□□□ 0.68
HOXA2O43364 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HOXA2O43364 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA2O43364 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA2O43364 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HOXA2O43364 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HOXA2O43364 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HOXA2O43364 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HOXA2O43364 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA2O43364 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA2O43364 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA2O43364 POLD2P1-201ENST00000511220 997 ntBASIC19.32■□□□□ 0.68
HOXA2O43364 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXA2O43364 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXA2O43364 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 AC139530.3-201ENST00000620344 690 ntBASIC19.32■□□□□ 0.68
HOXA2O43364 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA2O43364 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA2O43364 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA2O43364 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA2O43364 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HOXA2O43364 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXA2O43364 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXA2O43364 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HOXA2O43364 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HOXA2O43364 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 AC007967.3-201ENST00000434308 558 ntBASIC19.31■□□□□ 0.68
HOXA2O43364 IGHV3-22-201ENST00000520721 359 ntBASIC19.31■□□□□ 0.68
HOXA2O43364 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA2O43364 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXA2O43364 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA2O43364 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA2O43364 AP000867.4-201ENST00000641616 219 ntBASIC19.31■□□□□ 0.68
HOXA2O43364 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA2O43364 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA2O43364 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA2O43364 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HOXA2O43364 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA2O43364 AC096633.1-201ENST00000422446 749 ntBASIC19.3■□□□□ 0.68
HOXA2O43364 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HOXA2O43364 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXA2O43364 AC092865.5-201ENST00000545435 363 ntBASIC19.3■□□□□ 0.68
HOXA2O43364 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.3■□□□□ 0.68
HOXA2O43364 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
HOXA2O43364 AC025062.2-201ENST00000605477 670 ntBASIC19.3■□□□□ 0.68
HOXA2O43364 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms