Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.16■□□□□ 0.34
SPTBN2O15020 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.16■□□□□ 0.34
SPTBN2O15020 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.16■□□□□ 0.34
SPTBN2O15020 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.16■□□□□ 0.34
SPTBN2O15020 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.16■□□□□ 0.34
SPTBN2O15020 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.16■□□□□ 0.34
SPTBN2O15020 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SPTBN2O15020 AL163051.1-201ENST00000569214 1512 ntBASIC17.16■□□□□ 0.34
SPTBN2O15020 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.16■□□□□ 0.34
SPTBN2O15020 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SPTBN2O15020 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPTBN2O15020 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.16■□□□□ 0.34
SPTBN2O15020 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SPTBN2O15020 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
SPTBN2O15020 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.16■□□□□ 0.34
SPTBN2O15020 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPTBN2O15020 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SPTBN2O15020 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 AL627223.1-201ENST00000416693 442 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 MTCL1P1-201ENST00000446207 792 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 AC067863.1-201ENST00000494933 530 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.15■□□□□ 0.34
SPTBN2O15020 AC027307.3-201ENST00000594262 1100 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 AC073592.4-201ENST00000623827 446 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.15■□□□□ 0.34
SPTBN2O15020 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SPTBN2O15020 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.15■□□□□ 0.34
SPTBN2O15020 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.15■□□□□ 0.34
SPTBN2O15020 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 Z98044.1-201ENST00000632503 1764 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.15■□□□□ 0.34
SPTBN2O15020 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.15■□□□□ 0.34
SPTBN2O15020 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.15■□□□□ 0.34
SPTBN2O15020 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.15■□□□□ 0.34
SPTBN2O15020 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.15■□□□□ 0.34
SPTBN2O15020 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.15■□□□□ 0.34
SPTBN2O15020 KRT18P41-201ENST00000518924 1277 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 AC009154.2-201ENST00000621177 724 ntBASIC17.15■□□□□ 0.34
SPTBN2O15020 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.15■□□□□ 0.34
SPTBN2O15020 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SPTBN2O15020 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPTBN2O15020 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SPTBN2O15020 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SPTBN2O15020 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SPTBN2O15020 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.14■□□□□ 0.34
SPTBN2O15020 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.14■□□□□ 0.34
SPTBN2O15020 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SPTBN2O15020 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.14■□□□□ 0.33
SPTBN2O15020 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.14■□□□□ 0.33
SPTBN2O15020 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.14■□□□□ 0.33
SPTBN2O15020 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.14■□□□□ 0.33
SPTBN2O15020 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SPTBN2O15020 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.14■□□□□ 0.33
SPTBN2O15020 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SPTBN2O15020 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.14■□□□□ 0.33
SPTBN2O15020 MIR4751-201ENST00000578027 74 ntBASIC17.14■□□□□ 0.33
SPTBN2O15020 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPTBN2O15020 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.14■□□□□ 0.33
SPTBN2O15020 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPTBN2O15020 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPTBN2O15020 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPTBN2O15020 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPTBN2O15020 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.13■□□□□ 0.33
SPTBN2O15020 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
SPTBN2O15020 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPTBN2O15020 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SPTBN2O15020 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.13■□□□□ 0.33
SPTBN2O15020 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SPTBN2O15020 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SPTBN2O15020 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms