Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC1O00299 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC1O00299 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLIC1O00299 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC1O00299 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 UNC93B2-201ENST00000285383 730 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.11■□□□□ 0.33
CLIC1O00299 AC104390.1-201ENST00000555663 520 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.11■□□□□ 0.33
CLIC1O00299 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.11■□□□□ 0.33
CLIC1O00299 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLIC1O00299 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 AL024508.2-201ENST00000607749 1894 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLIC1O00299 AL645608.8-201ENST00000606034 2086 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 AC139713.2-201ENST00000641328 2723 ntBASIC17.11■□□□□ 0.33
CLIC1O00299 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLIC1O00299 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.11■□□□□ 0.33
CLIC1O00299 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.1■□□□□ 0.33
CLIC1O00299 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.1■□□□□ 0.33
CLIC1O00299 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLIC1O00299 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.1■□□□□ 0.33
CLIC1O00299 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIC1O00299 CCR12P-201ENST00000446203 998 ntBASIC17.1■□□□□ 0.33
CLIC1O00299 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 MIR3180-4-201ENST00000582223 153 ntBASIC17.1■□□□□ 0.33
CLIC1O00299 AC112497.1-201ENST00000624824 639 ntBASIC17.1■□□□□ 0.33
CLIC1O00299 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.1■□□□□ 0.33
CLIC1O00299 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIC1O00299 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 AC092338.2-201ENST00000568827 1415 ntBASIC17.1■□□□□ 0.33
CLIC1O00299 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC1O00299 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
CLIC1O00299 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLIC1O00299 PKD1P1-201ENST00000458669 6805 ntBASIC17.09■□□□□ 0.33
CLIC1O00299 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLIC1O00299 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC1O00299 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLIC1O00299 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC1O00299 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIC1O00299 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLIC1O00299 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC1O00299 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 RBM17P1-201ENST00000453646 1190 ntBASIC17.09■□□□□ 0.33
CLIC1O00299 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.09■□□□□ 0.33
CLIC1O00299 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 BX088651.1-201ENST00000540551 451 ntBASIC17.09■□□□□ 0.33
CLIC1O00299 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.09■□□□□ 0.33
CLIC1O00299 Z99916.2-201ENST00000604037 246 ntBASIC17.09■□□□□ 0.33
CLIC1O00299 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIC1O00299 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC1O00299 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC1O00299 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.08■□□□□ 0.33
CLIC1O00299 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC1O00299 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC1O00299 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC1O00299 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
CLIC1O00299 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC1O00299 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.08■□□□□ 0.33
CLIC1O00299 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.08■□□□□ 0.32
CLIC1O00299 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.08■□□□□ 0.32
CLIC1O00299 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.08■□□□□ 0.32
CLIC1O00299 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CLIC1O00299 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.08■□□□□ 0.32
CLIC1O00299 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.08■□□□□ 0.32
CLIC1O00299 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.08■□□□□ 0.32
CLIC1O00299 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.08■□□□□ 0.32
CLIC1O00299 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.08■□□□□ 0.32
CLIC1O00299 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms