Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.34■□□□□ 0.53
AP3B1O00203 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
AP3B1O00203 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
AP3B1O00203 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
AP3B1O00203 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3B1O00203 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
AP3B1O00203 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3B1O00203 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP3B1O00203 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
AP3B1O00203 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3B1O00203 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.33■□□□□ 0.52
AP3B1O00203 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.33■□□□□ 0.52
AP3B1O00203 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 AC145285.6-201ENST00000604632 637 ntBASIC18.33■□□□□ 0.52
AP3B1O00203 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.33■□□□□ 0.52
AP3B1O00203 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3B1O00203 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.33■□□□□ 0.52
AP3B1O00203 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
AP3B1O00203 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.32■□□□□ 0.52
AP3B1O00203 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
AP3B1O00203 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.32■□□□□ 0.52
AP3B1O00203 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 AC113404.2-201ENST00000507884 177 ntBASIC18.32■□□□□ 0.52
AP3B1O00203 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.32■□□□□ 0.52
AP3B1O00203 AC141257.4-201ENST00000634557 245 ntBASIC18.32■□□□□ 0.52
AP3B1O00203 AC136944.6-201ENST00000634818 245 ntBASIC18.32■□□□□ 0.52
AP3B1O00203 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP3B1O00203 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP3B1O00203 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
AP3B1O00203 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AP3B1O00203 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.32■□□□□ 0.52
AP3B1O00203 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3B1O00203 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.31■□□□□ 0.52
AP3B1O00203 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
AP3B1O00203 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 AC093827.2-201ENST00000512654 315 ntBASIC18.31■□□□□ 0.52
AP3B1O00203 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.31■□□□□ 0.52
AP3B1O00203 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms