Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 AP004607.4-201ENST00000530158 1459 ntBASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 AC108860.2-201ENST00000562760 2183 ntBASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 MADD-208ENST00000405573 1823 ntTSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHKB-CPT1BH3BT56 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CHKB-CPT1BH3BT56 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHKB-CPT1BH3BT56 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHKB-CPT1BH3BT56 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.05□□□□□ -0.8
CHKB-CPT1BH3BT56 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms