Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 IGHGP-201ENST00000390555 1178 ntBASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 NUS1P1-201ENST00000446295 882 ntBASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 AC111152.3-201ENST00000569699 673 ntBASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 RN7SL510P-201ENST00000581311 263 ntBASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA2E9PIF3 AC126763.1-201ENST00000552015 2118 ntBASIC16.52■□□□□ 0.23
NPIPA2E9PIF3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.52■□□□□ 0.23
NPIPA2E9PIF3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA2E9PIF3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NPIPA2E9PIF3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA2E9PIF3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA2E9PIF3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA2E9PIF3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 AL163051.1-201ENST00000569214 1512 ntBASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 AL845331.1-201ENST00000424978 1190 ntBASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 GUSBP12-201ENST00000513727 720 ntBASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA2E9PIF3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms