Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 NCF1C-201ENST00000438382 1427 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AL139424.1-201ENST00000607572 797 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AC064836.3-201ENST00000607928 673 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AL353593.2-201ENST00000602529 1483 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AP006288.1-201ENST00000446065 395 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 AC108073.2-201ENST00000464002 357 ntBASIC20.62■□□□□ 0.89
LOC285556D6RIA3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC285556D6RIA3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC285556D6RIA3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 PGM5P2-202ENST00000637225 1043 ntBASIC20.6■□□□□ 0.89
LOC285556D6RIA3 CROCCP3-202ENST00000420820 1947 ntBASIC20.6■□□□□ 0.89
LOC285556D6RIA3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LOC285556D6RIA3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 AC023274.1-201ENST00000418278 595 ntBASIC20.59■□□□□ 0.89
LOC285556D6RIA3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 AC134684.3-201ENST00000641758 218 ntBASIC20.59■□□□□ 0.89
LOC285556D6RIA3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC285556D6RIA3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LOC285556D6RIA3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms