Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.58■□□□□ 0.72
USP27XA6NNY8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.58■□□□□ 0.72
USP27XA6NNY8 AC004264.1-201ENST00000608354 794 ntBASIC19.58■□□□□ 0.72
USP27XA6NNY8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.58■□□□□ 0.72
USP27XA6NNY8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
USP27XA6NNY8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 LINC01126-201ENST00000623515 1646 ntBASIC19.58■□□□□ 0.72
USP27XA6NNY8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP27XA6NNY8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 LINC02199-201ENST00000506655 2702 ntBASIC19.57■□□□□ 0.72
USP27XA6NNY8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 AC004980.1-204ENST00000429707 299 ntBASIC19.57■□□□□ 0.72
USP27XA6NNY8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 PRKY-204ENST00000533551 1019 ntBASIC19.57■□□□□ 0.72
USP27XA6NNY8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP27XA6NNY8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP27XA6NNY8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.56■□□□□ 0.72
USP27XA6NNY8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 AC026185.1-201ENST00000445748 174 ntBASIC19.56■□□□□ 0.72
USP27XA6NNY8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
USP27XA6NNY8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP27XA6NNY8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 DOC2GP-204ENST00000639052 2548 ntBASIC19.55■□□□□ 0.72
USP27XA6NNY8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 POM121L13P-201ENST00000422362 380 ntBASIC19.55■□□□□ 0.72
USP27XA6NNY8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
USP27XA6NNY8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP27XA6NNY8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms