Protein–RNA interactions for Protein: A6NNM3

RIMBP3B, RIMS-binding protein 3B, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3BA6NNM3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RIMBP3BA6NNM3 AC004890.2-204ENST00000481968 304 ntBASIC28.57■■■□□ 2.16
RIMBP3BA6NNM3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC28.57■■■□□ 2.16
RIMBP3BA6NNM3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
RIMBP3BA6NNM3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 LBX2-AS1-202ENST00000603175 2083 ntBASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 HLA-DPB2-205ENST00000435074 1188 ntBASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 SPTSSB-204ENST00000617024 1292 ntBASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 AC068587.10-201ENST00000641210 219 ntBASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RIMBP3BA6NNM3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 SPDYE11-202ENST00000450699 704 ntBASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 SPDYE9P-201ENST00000570642 692 ntBASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 SPDYE10P-202ENST00000612005 668 ntBASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 SPDYE8P-202ENST00000612377 668 ntBASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RIMBP3BA6NNM3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 AC122714.2-201ENST00000502787 707 ntBASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 AC005237.2-201ENST00000434368 219 ntBASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 AL033527.4-201ENST00000641026 673 ntBASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RIMBP3BA6NNM3 AC009102.3-201ENST00000623118 1491 ntBASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 LINC00602-201ENST00000629776 2065 ntBASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 GIMAP3P-201ENST00000495150 836 ntBASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 AC009118.2-201ENST00000613275 655 ntBASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC28.53■■■□□ 2.16
RIMBP3BA6NNM3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 MTMR9LP-203ENST00000426597 1545 ntBASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
RIMBP3BA6NNM3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC28.51■■■□□ 2.16
RIMBP3BA6NNM3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
RIMBP3BA6NNM3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
RIMBP3BA6NNM3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
RIMBP3BA6NNM3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
RIMBP3BA6NNM3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC28.51■■■□□ 2.15
RIMBP3BA6NNM3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
RIMBP3BA6NNM3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC28.51■■■□□ 2.15
RIMBP3BA6NNM3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RIMBP3BA6NNM3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms