Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 BCL2-203ENST00000589955 5011 ntBASIC12.79□□□□□ -0.36
LINC01546A6NGU7 AC116353.5-201ENST00000638148 1699 ntBASIC12.79□□□□□ -0.36
LINC01546A6NGU7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01546A6NGU7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AC100803.2-201ENST00000562459 1963 ntBASIC12.78□□□□□ -0.36
LINC01546A6NGU7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AC006449.5-201ENST00000610658 2098 ntBASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 DUSP5P2-201ENST00000426873 1033 ntBASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01546A6NGU7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01546A6NGU7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01546A6NGU7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LINC01546A6NGU7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01546A6NGU7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LINC01546A6NGU7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01546A6NGU7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 AC004264.1-201ENST00000608354 794 ntBASIC12.77□□□□□ -0.37
LINC01546A6NGU7 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.77□□□□□ -0.37
LINC01546A6NGU7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 AL513523.2-202ENST00000427283 2040 ntBASIC12.77□□□□□ -0.37
LINC01546A6NGU7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms