Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 DUT-205ENST00000558813 769 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 MNT-208ENST00000575394 606 ntTSL 4 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 NEK4P2-201ENST00000580004 1012 ntBASIC20■□□□□ 0.79
TRIM49BA6NDI0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49BA6NDI0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 KRT18P55-202ENST00000578578 1546 ntBASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 AC141257.4-201ENST00000634557 245 ntBASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 AC136944.6-201ENST00000634818 245 ntBASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 KRT18P22-201ENST00000402024 1347 ntBASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49BA6NDI0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 AC145285.6-201ENST00000604632 637 ntBASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 AL138966.2-201ENST00000621997 464 ntBASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49BA6NDI0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 PP12613-201ENST00000424958 2230 ntBASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms