Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 KRT8P47-201ENST00000604727 1398 ntBASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 LINC01311-201ENST00000565162 1445 ntBASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV5S1A1TA0A578 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV5S1A1TA0A578 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.89■□□□□ 0.62
TCRBV5S1A1TA0A578 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV5S1A1TA0A578 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 TMPOP1-202ENST00000424642 1267 ntBASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 RNF126P1-202ENST00000569893 925 ntBASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV5S1A1TA0A578 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 AP003733.1-201ENST00000491725 852 ntBASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 AC022898.2-201ENST00000616822 1312 ntBASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV5S1A1TA0A578 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 AL390719.2-201ENST00000606993 987 ntBASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 AC009154.2-201ENST00000621177 724 ntBASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV5S1A1TA0A578 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms