Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 MTMR9LP-203ENST00000426597 1545 ntBASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 AC079776.2-201ENST00000641154 1609 ntBASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 LINC00602-201ENST00000629776 2065 ntBASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 MKNK2P1-201ENST00000437526 628 ntBASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 AL024508.2-201ENST00000607749 1894 ntBASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCH2Q9Y6C5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCH2Q9Y6C5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.39■□□□□ 0.86
PTCH2Q9Y6C5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 CRYGEP-201ENST00000412192 528 ntBASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCH2Q9Y6C5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 AC004817.3-201ENST00000602957 2129 ntBASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 HLA-J-202ENST00000469281 1241 ntBASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCH2Q9Y6C5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms