Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 LAGE3P1-201ENST00000425356 484 ntBASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 AC007967.2-201ENST00000432613 625 ntBASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 AC004967.1-201ENST00000453589 447 ntBASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC2Q9Y5Z7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
HCFC2Q9Y5Z7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.89■□□□□ 0.62
HCFC2Q9Y5Z7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HCFC2Q9Y5Z7 AC005082.1-201ENST00000413042 2259 ntBASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AC116562.4-201ENST00000641316 2276 ntBASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AC004832.2-201ENST00000426397 482 ntBASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AL355385.1-201ENST00000606123 409 ntBASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AC079781.4-201ENST00000641908 219 ntBASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC2Q9Y5Z7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms