Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 AC010327.4-202ENST00000591484 748 ntBASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 Z83851.2-201ENST00000609564 659 ntBASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHAC2Q9Y5I4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 UNC93B6-202ENST00000528242 690 ntBASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 AL139424.1-201ENST00000607572 797 ntBASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHAC2Q9Y5I4 AC126763.1-201ENST00000552015 2118 ntBASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 AC007967.2-201ENST00000432613 625 ntBASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 AL691403.2-201ENST00000618460 490 ntBASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHAC2Q9Y5I4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 AC010460.3-201ENST00000511359 1579 ntBASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 FAM197Y3-203ENST00000618346 717 ntBASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 AL139288.1-201ENST00000623748 933 ntBASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 AC107918.4-202ENST00000641623 219 ntBASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 ESPNP-201ENST00000270691 2015 ntBASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
PCDHAC2Q9Y5I4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.03
PCDHAC2Q9Y5I4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.45■■□□□ 1.03
PCDHAC2Q9Y5I4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 KRT18P3-201ENST00000451602 1288 ntBASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms