Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 STARP1-201ENST00000397973 869 ntBASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 ATP5G2P1-201ENST00000433580 426 ntBASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NEK4P2-201ENST00000580004 1012 ntBASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 HYMAI.1-201ENST00000620949 238 ntBASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 LINC01311-201ENST00000565162 1445 ntBASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 AC008556.1-201ENST00000610908 2040 ntBASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 AC018470.1-201ENST00000624790 3129 ntBASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA4Q9Y5G9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ARL4AP4-201ENST00000434170 518 ntBASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 GCSHP2-201ENST00000560971 527 ntBASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 MIR3180-5-201ENST00000583743 153 ntBASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA4Q9Y5G9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms