Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 KRT8P3-201ENST00000519669 1449 ntBASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 CRYGFP-201ENST00000418459 633 ntBASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 MFAP1P1-201ENST00000442257 1255 ntBASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 SNORA78-201ENST00000459373 127 ntBASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 AC096733.2-201ENST00000609937 1394 ntBASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 AC083906.6-201ENST00000641366 219 ntBASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HHLA3Q9XRX5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms