Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 AC093010.1-201ENST00000473625 1624 ntBASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 LINC01126-201ENST00000623515 1646 ntBASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 AP005242.2-201ENST00000580065 1175 ntBASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 CR769767.2-201ENST00000622735 460 ntBASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHMP2BQ9UQN3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 AC006116.8-202ENST00000587620 1550 ntBASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP2BQ9UQN3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 AC139713.2-201ENST00000641328 2723 ntBASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 AL023803.3-201ENST00000615559 522 ntBASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms