Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 FAM8A6P-201ENST00000407496 1135 ntBASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 AC112907.2-201ENST00000448639 330 ntBASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 AC022616.7-201ENST00000525383 220 ntBASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 AP000997.3-201ENST00000623333 2250 ntBASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4E1Q9UPM8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 AC026471.1-201ENST00000564629 3026 ntBASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
AP4E1Q9UPM8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4E1Q9UPM8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 AC132938.6-201ENST00000623828 1655 ntBASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4E1Q9UPM8 HBZP1-201ENST00000354915 429 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms