Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 REXO1L6P-202ENST00000619970 1078 ntBASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 WIZP1-201ENST00000531444 2299 ntBASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DENND2AQ9ULE3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 AL160237.2-201ENST00000556165 472 ntBASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 AL591684.3-201ENST00000605187 298 ntBASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DENND2AQ9ULE3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 SAPCD2P3-201ENST00000455031 850 ntBASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 AC009533.2-201ENST00000543664 586 ntBASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 AL121912.1-201ENST00000603683 238 ntBASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 AL138831.2-201ENST00000606564 490 ntBASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.9■■□□□ 1.1
DENND2AQ9ULE3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
DENND2AQ9ULE3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.89■■□□□ 1.1
DENND2AQ9ULE3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.89■■□□□ 1.1
DENND2AQ9ULE3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 AC112698.1-201ENST00000510299 916 ntBASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 TP73-AS1-210ENST00000637775 1455 ntBASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DENND2AQ9ULE3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms