Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX4Q9UIU6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 KRT18P56-201ENST00000507275 550 ntBASIC19.36■□□□□ 0.69
SIX4Q9UIU6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 AP000997.3-201ENST00000623333 2250 ntBASIC19.36■□□□□ 0.69
SIX4Q9UIU6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SIX4Q9UIU6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 AC246785.2-201ENST00000432512 513 ntBASIC19.35■□□□□ 0.69
SIX4Q9UIU6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 AC112698.1-201ENST00000510299 916 ntBASIC19.35■□□□□ 0.69
SIX4Q9UIU6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 AC005336.2-201ENST00000593183 939 ntBASIC19.35■□□□□ 0.69
SIX4Q9UIU6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms