Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 CNN2P11-201ENST00000429351 262 ntBASIC17.97■□□□□ 0.47
NCDNQ9UBB6 AC009947.1-201ENST00000444350 727 ntBASIC17.97■□□□□ 0.47
NCDNQ9UBB6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 AC107918.4-202ENST00000641623 219 ntBASIC17.97■□□□□ 0.47
NCDNQ9UBB6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCDNQ9UBB6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.96■□□□□ 0.47
NCDNQ9UBB6 MCCD1P2-201ENST00000423228 335 ntBASIC17.96■□□□□ 0.47
NCDNQ9UBB6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 MIR1199-201ENST00000621445 119 ntBASIC17.96■□□□□ 0.47
NCDNQ9UBB6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCDNQ9UBB6 AC125437.2-201ENST00000625180 2167 ntBASIC17.96■□□□□ 0.46
NCDNQ9UBB6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.95■□□□□ 0.46
NCDNQ9UBB6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 YBX1P5-201ENST00000509441 847 ntBASIC17.95■□□□□ 0.46
NCDNQ9UBB6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 AC008687.5-201ENST00000593746 558 ntBASIC17.95■□□□□ 0.46
NCDNQ9UBB6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 AC011467.2-201ENST00000598425 242 ntBASIC17.95■□□□□ 0.46
NCDNQ9UBB6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCDNQ9UBB6 KRT8P32-201ENST00000512863 1461 ntBASIC17.95■□□□□ 0.46
NCDNQ9UBB6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 LAGE3P1-201ENST00000425356 484 ntBASIC17.94■□□□□ 0.46
NCDNQ9UBB6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.94■□□□□ 0.46
NCDNQ9UBB6 AC097374.2-201ENST00000618617 1306 ntBASIC17.94■□□□□ 0.46
NCDNQ9UBB6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms