Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC25.88■■□□□ 1.73
SLC52A1Q9NWF4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC52A1Q9NWF4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 AC010460.3-201ENST00000511359 1579 ntBASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 AC108751.1-201ENST00000490852 363 ntBASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 YBX1P5-201ENST00000509441 847 ntBASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 AC005332.7-201ENST00000614046 2005 ntBASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 AFG3L1P-217ENST00000557444 2447 ntBASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC52A1Q9NWF4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 AC211486.1-202ENST00000416371 468 ntBASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 KRT18P2-201ENST00000447938 1258 ntBASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 AC211476.1-201ENST00000503899 468 ntBASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC52A1Q9NWF4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 AL589182.2-201ENST00000619332 1049 ntBASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC25.84■■□□□ 1.73
SLC52A1Q9NWF4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 AC004817.3-201ENST00000602957 2129 ntBASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 LINC02084-201ENST00000606069 1096 ntBASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms