Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 Z69720.1-201ENST00000601483 472 ntBASIC18.67■□□□□ 0.58
POLR3BQ9NW08 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3BQ9NW08 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 AC024563.2-201ENST00000603282 481 ntBASIC18.66■□□□□ 0.58
POLR3BQ9NW08 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3BQ9NW08 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.65■□□□□ 0.58
POLR3BQ9NW08 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 AL590627.1-203ENST00000421194 1026 ntBASIC18.65■□□□□ 0.58
POLR3BQ9NW08 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
POLR3BQ9NW08 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR3BQ9NW08 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
POLR3BQ9NW08 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR3BQ9NW08 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR3BQ9NW08 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR3BQ9NW08 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.64■□□□□ 0.58
POLR3BQ9NW08 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR3BQ9NW08 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms