Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 HOXB1-202ENST00000577092 1414 ntBASIC16.93■□□□□ 0.3
RLIMQ9NVW2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 AC080080.1-201ENST00000625121 2420 ntBASIC16.92■□□□□ 0.3
RLIMQ9NVW2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 PHGDH-209ENST00000641074 1780 ntBASIC16.92■□□□□ 0.3
RLIMQ9NVW2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AC010947.1-201ENST00000623454 693 ntBASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AC012317.2-201ENST00000623305 2251 ntBASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 AC009053.2-201ENST00000563701 2365 ntBASIC16.92■□□□□ 0.3
RLIMQ9NVW2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.92■□□□□ 0.3
RLIMQ9NVW2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 PCDHA12-202ENST00000613593 2588 ntBASIC16.91■□□□□ 0.3
RLIMQ9NVW2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 PP12613-201ENST00000424958 2230 ntBASIC16.91■□□□□ 0.3
RLIMQ9NVW2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 EGLN1P1-201ENST00000531623 762 ntBASIC16.91■□□□□ 0.3
RLIMQ9NVW2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 AC009102.3-201ENST00000623118 1491 ntBASIC16.91■□□□□ 0.3
RLIMQ9NVW2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.91■□□□□ 0.3
RLIMQ9NVW2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms