Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 GMCL1P1-201ENST00000463439 1581 ntBASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 TSPY15P-201ENST00000457163 923 ntBASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 AL390955.1-201ENST00000428694 934 ntBASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 NAPSB-206ENST00000562112 1266 ntBASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIN7CQ9NUP9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 SLC25A1P2-201ENST00000430693 912 ntBASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms