Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.64■■■□□ 2.51e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-214ENST00000478586 534 ntTSL 427.32■■□□□ 1.961e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-207ENST00000455997 4661 ntTSL 1 (best)25.85■■□□□ 1.731e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.581e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-205ENST00000441228 2013 ntTSL 212.27□□□□□ -0.451e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-206ENST00000445499 583 ntTSL 411.8□□□□□ -0.521e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-212ENST00000464524 571 ntTSL 43.25□□□□□ -1.891e-7■■□□□ 12
DROSHAQ9NRR4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.711e-8■■□□□ 12
DROSHAQ9NRR4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.272e-22■■□□□ 12
DROSHAQ9NRR4 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.133e-11■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-214ENST00000520485 1548 ntTSL 234.97■■■■□ 3.191e-7■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC25.65■■□□□ 1.71e-7■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-215ENST00000522403 995 ntTSL 524.65■■□□□ 1.541e-7■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-221ENST00000549047 1040 ntTSL 523.38■■□□□ 1.331e-7■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.311e-7■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-218ENST00000523460 572 ntTSL 422.2■■□□□ 1.141e-7■■□□□ 12
DROSHAQ9NRR4 ARFGAP1-206ENST00000518601 905 ntTSL 520.69■□□□□ 0.91e-7■■□□□ 12
DROSHAQ9NRR4 BSG-205ENST00000571735 2155 ntTSL 223.72■■□□□ 1.393e-6■■□□□ 12
DROSHAQ9NRR4 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.265e-7■■□□□ 12
DROSHAQ9NRR4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.045e-6■■□□□ 12
DROSHAQ9NRR4 RHOT2-222ENST00000569675 2559 ntTSL 226.09■■□□□ 1.775e-6■■□□□ 12
DROSHAQ9NRR4 RHOT2-218ENST00000568636 3098 ntTSL 223■■□□□ 1.275e-6■■□□□ 12
DROSHAQ9NRR4 RHOT2-227ENST00000602564 3695 ntTSL 520.68■□□□□ 0.95e-6■■□□□ 12
DROSHAQ9NRR4 SEPT2-244ENST00000495463 501 ntTSL 443.41■■■■■ 4.542e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-234ENST00000475474 749 ntTSL 239.84■■■■□ 3.972e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-238ENST00000482304 740 ntTSL 238.47■■■■□ 3.752e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-227ENST00000462147 576 ntTSL 437.96■■■■□ 3.672e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-229ENST00000466211 584 ntTSL 336.49■■■■□ 3.432e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-216ENST00000434955 480 ntTSL 336.19■■■■□ 3.382e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC35.43■■■■□ 3.262e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-217ENST00000436795 775 ntTSL 535.13■■■■□ 3.212e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-209ENST00000411484 561 ntTSL 434.74■■■■□ 3.152e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-226ENST00000461048 1163 ntTSL 1 (best)34.29■■■■□ 3.082e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-243ENST00000494824 565 ntTSL 534.29■■■■□ 3.082e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-231ENST00000469175 486 ntTSL 334.18■■■■□ 3.062e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-215ENST00000429791 724 ntTSL 433.02■■■□□ 2.882e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-210ENST00000420786 539 ntTSL 530.61■■■□□ 2.492e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.072e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC27.84■■■□□ 2.052e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-213ENST00000428282 1005 ntTSL 327.48■■□□□ 1.992e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-242ENST00000492978 775 ntTSL 327.48■■□□□ 1.992e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-218ENST00000437066 574 ntTSL 427.03■■□□□ 1.922e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC23.61■■□□□ 1.372e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-224ENST00000457335 570 ntTSL 418.33■□□□□ 0.532e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-240ENST00000484648 218 ntTSL 317.7■□□□□ 0.422e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-212ENST00000425899 738 ntTSL 517.68■□□□□ 0.422e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-230ENST00000467971 571 ntTSL 217.23■□□□□ 0.352e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.132e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.072e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-214ENST00000428524 644 ntTSL 515.22■□□□□ 0.032e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-219ENST00000441533 372 ntTSL 515.13■□□□□ 0.012e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-207ENST00000407017 650 ntTSL 412.62□□□□□ -0.392e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-221ENST00000445030 575 ntTSL 312.62□□□□□ -0.392e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-241ENST00000484740 563 ntTSL 39.22□□□□□ -0.932e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-220ENST00000443492 558 ntTSL 58.9□□□□□ -0.982e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-232ENST00000469434 583 ntTSL 36.81□□□□□ -1.322e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-228ENST00000464128 565 ntTSL 45.4□□□□□ -1.552e-7■■□□□ 12
DROSHAQ9NRR4 SEPT2-233ENST00000473479 659 ntTSL 24.95□□□□□ -1.622e-7■■□□□ 12
DROSHAQ9NRR4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.751e-6■■□□□ 11.9
DROSHAQ9NRR4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.381e-6■■□□□ 11.9
DROSHAQ9NRR4 HDGF-204ENST00000465180 2060 ntTSL 1 (best)23.37■■□□□ 1.331e-6■■□□□ 11.9
DROSHAQ9NRR4 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC20.16■□□□□ 0.821e-6■■□□□ 11.9
DROSHAQ9NRR4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.422e-9■■□□□ 11.9
DROSHAQ9NRR4 TMUB1-207ENST00000492838 550 ntTSL 516.93■□□□□ 0.32e-9■■□□□ 11.9
DROSHAQ9NRR4 WDR20-213ENST00000557485 491 ntTSL 329.39■■■□□ 2.296e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-209ENST00000556094 785 ntTSL 327.79■■■□□ 2.046e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC23.91■■□□□ 1.426e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC21.98■■□□□ 1.116e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC21.07■□□□□ 0.966e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC20.77■□□□□ 0.916e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-220ENST00000561154 541 ntTSL 416.9■□□□□ 0.36e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-210ENST00000556511 2117 ntTSL 1 (best) BASIC16.37■□□□□ 0.216e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-216ENST00000558567 586 ntTSL 5 BASIC16.31■□□□□ 0.26e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-207ENST00000555879 2175 ntTSL 215.4■□□□□ 0.066e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.026e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC13.94□□□□□ -0.186e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-212ENST00000557186 631 ntTSL 313.62□□□□□ -0.236e-7■■□□□ 11.9
DROSHAQ9NRR4 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC13.61□□□□□ -0.236e-7■■□□□ 11.9
DROSHAQ9NRR4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.931e-6■■□□□ 11.9
DROSHAQ9NRR4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC25.85■■□□□ 1.731e-6■■□□□ 11.9
DROSHAQ9NRR4 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.381e-6■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC45.6■■■■■ 4.894e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC43.81■■■■■ 4.64e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC36.4■■■■□ 3.424e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC33.91■■■■□ 3.024e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-215ENST00000567696 2199 ntTSL 232.19■■■□□ 2.744e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-217ENST00000569143 564 ntTSL 431.94■■■□□ 2.74e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-214ENST00000567414 735 ntTSL 231.31■■■□□ 2.64e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC30.41■■■□□ 2.464e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-207ENST00000561750 675 ntTSL 230.37■■■□□ 2.454e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.194e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-208ENST00000562141 650 ntTSL 526.63■■□□□ 1.854e-7■■□□□ 11.9
DROSHAQ9NRR4 HAGHL-209ENST00000562187 100 ntTSL 320.17■□□□□ 0.824e-7■■□□□ 11.9
DROSHAQ9NRR4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.73■■■□□ 2.512e-6■■□□□ 11.9
DROSHAQ9NRR4 JPT2-213ENST00000569256 911 ntTSL 1 (best)27.48■■□□□ 1.992e-6■■□□□ 11.9
DROSHAQ9NRR4 JPT2-209ENST00000566742 593 ntTSL 425.59■■□□□ 1.692e-6■■□□□ 11.9
DROSHAQ9NRR4 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC18.2■□□□□ 0.52e-6■■□□□ 11.9
DROSHAQ9NRR4 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.462e-6■■□□□ 11.9
DROSHAQ9NRR4 COL9A3-213ENST00000489045 838 ntTSL 535.54■■■■□ 3.282e-6■■□□□ 11.9
Retrieved 100 of 16,331 protein–RNA pairs in 98.4 ms