Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDC42SE2Q9NRR3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 AC097488.1-201ENST00000507834 756 ntBASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 FAM197Y4-202ENST00000622692 608 ntBASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC42SE2Q9NRR3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 AC009065.1-201ENST00000564055 1225 ntBASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC42SE2Q9NRR3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 AC108860.2-201ENST00000562760 2183 ntBASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 KRT18P23-201ENST00000435622 1283 ntBASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC42SE2Q9NRR3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms