Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GCM1Q9NP62 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GCM1Q9NP62 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GCM1Q9NP62 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GCM1Q9NP62 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GCM1Q9NP62 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 HLA-F-220ENST00000434407 884 ntBASIC15.52■□□□□ 0.08
GCM1Q9NP62 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 ZNF444P1-201ENST00000559497 298 ntBASIC15.52■□□□□ 0.08
GCM1Q9NP62 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GCM1Q9NP62 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
GCM1Q9NP62 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GCM1Q9NP62 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
GCM1Q9NP62 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GCM1Q9NP62 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
GCM1Q9NP62 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GCM1Q9NP62 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GCM1Q9NP62 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GCM1Q9NP62 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.52■□□□□ 0.07
GCM1Q9NP62 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.52■□□□□ 0.07
GCM1Q9NP62 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 AL121956.5-201ENST00000625261 221 ntBASIC15.51■□□□□ 0.07
GCM1Q9NP62 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.51■□□□□ 0.07
GCM1Q9NP62 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GCM1Q9NP62 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GCM1Q9NP62 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
GCM1Q9NP62 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GCM1Q9NP62 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GCM1Q9NP62 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GCM1Q9NP62 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms