Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PIF1Q9H611 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PIF1Q9H611 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 AL353807.1-201ENST00000427475 662 ntBASIC17.37■□□□□ 0.37
PIF1Q9H611 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.37■□□□□ 0.37
PIF1Q9H611 UBE2SP1-201ENST00000450587 669 ntBASIC17.37■□□□□ 0.37
PIF1Q9H611 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PIF1Q9H611 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.37■□□□□ 0.37
PIF1Q9H611 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.37■□□□□ 0.37
PIF1Q9H611 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PIF1Q9H611 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PIF1Q9H611 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
PIF1Q9H611 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 GCSHP5-201ENST00000443090 522 ntBASIC17.36■□□□□ 0.37
PIF1Q9H611 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
PIF1Q9H611 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.36■□□□□ 0.37
PIF1Q9H611 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.36■□□□□ 0.37
PIF1Q9H611 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 AC142381.4-202ENST00000563973 229 ntBASIC17.36■□□□□ 0.37
PIF1Q9H611 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.36■□□□□ 0.37
PIF1Q9H611 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.36■□□□□ 0.37
PIF1Q9H611 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.36■□□□□ 0.37
PIF1Q9H611 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.36■□□□□ 0.37
PIF1Q9H611 AL135905.2-201ENST00000584934 1404 ntBASIC17.36■□□□□ 0.37
PIF1Q9H611 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 AC108860.2-201ENST00000562760 2183 ntBASIC17.36■□□□□ 0.37
PIF1Q9H611 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PIF1Q9H611 AL109659.2-201ENST00000606809 1674 ntBASIC17.36■□□□□ 0.37
PIF1Q9H611 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 OR6D1P-203ENST00000641209 4860 ntBASIC17.35■□□□□ 0.37
PIF1Q9H611 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PIF1Q9H611 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 KSR1P1-201ENST00000446298 240 ntBASIC17.35■□□□□ 0.37
PIF1Q9H611 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 RARRES2P10-201ENST00000564312 460 ntBASIC17.35■□□□□ 0.37
PIF1Q9H611 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.35■□□□□ 0.37
PIF1Q9H611 AL353708.3-201ENST00000610272 989 ntBASIC17.35■□□□□ 0.37
PIF1Q9H611 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
PIF1Q9H611 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PIF1Q9H611 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PIF1Q9H611 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
PIF1Q9H611 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms