Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 SPDYE13P-201ENST00000445314 798 ntBASIC16.84■□□□□ 0.29
UBQLN3Q9H347 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 ZNF444P1-201ENST00000559497 298 ntBASIC16.84■□□□□ 0.29
UBQLN3Q9H347 AL136038.3-201ENST00000561909 1096 ntBASIC16.84■□□□□ 0.29
UBQLN3Q9H347 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 AC091076.1-201ENST00000610741 619 ntBASIC16.84■□□□□ 0.29
UBQLN3Q9H347 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 AL157888.1-201ENST00000631930 593 ntBASIC16.84■□□□□ 0.29
UBQLN3Q9H347 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 AC092597.1-201ENST00000487352 616 ntBASIC16.83■□□□□ 0.28
UBQLN3Q9H347 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.83■□□□□ 0.28
UBQLN3Q9H347 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
UBQLN3Q9H347 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 AC005332.1-201ENST00000577698 1310 ntBASIC16.82■□□□□ 0.28
UBQLN3Q9H347 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 AP000550.4-202ENST00000639755 178 ntBASIC16.82■□□□□ 0.28
UBQLN3Q9H347 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 AC093677.2-201ENST00000600169 1863 ntBASIC16.82■□□□□ 0.28
UBQLN3Q9H347 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN3Q9H347 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms