Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 FAM197Y8-203ENST00000450145 560 ntBASIC18.9■□□□□ 0.62
LRRC3Q9BY71 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 BX640515.1-201ENST00000617215 977 ntBASIC18.9■□□□□ 0.62
LRRC3Q9BY71 AC148477.8-201ENST00000624298 468 ntBASIC18.9■□□□□ 0.62
LRRC3Q9BY71 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 INTS4P1-201ENST00000438455 1935 ntBASIC18.9■□□□□ 0.62
LRRC3Q9BY71 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC3Q9BY71 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRC3Q9BY71 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LRRC3Q9BY71 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.89■□□□□ 0.62
LRRC3Q9BY71 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRC3Q9BY71 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
LRRC3Q9BY71 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 KRT18P65-201ENST00000439811 1286 ntBASIC18.89■□□□□ 0.61
LRRC3Q9BY71 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 AC009533.2-201ENST00000543664 586 ntBASIC18.89■□□□□ 0.61
LRRC3Q9BY71 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC3Q9BY71 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 AC011467.2-201ENST00000598425 242 ntBASIC18.88■□□□□ 0.61
LRRC3Q9BY71 AL671883.3-201ENST00000603274 991 ntBASIC18.88■□□□□ 0.61
LRRC3Q9BY71 AC008608.2-201ENST00000606089 416 ntBASIC18.88■□□□□ 0.61
LRRC3Q9BY71 AL355877.3-201ENST00000622820 899 ntBASIC18.88■□□□□ 0.61
LRRC3Q9BY71 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC3Q9BY71 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC3Q9BY71 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms