Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 LINC01711-201ENST00000598340 967 ntBASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 AC104692.2-201ENST00000603054 253 ntBASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 LINC00167-201ENST00000530583 1419 ntBASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 EMBP1-201ENST00000458200 901 ntBASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TRAIPQ9BWF2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 AC011840.4-201ENST00000578471 627 ntBASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 NSUN5P1-202ENST00000421140 1535 ntBASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 NSUN5P2-203ENST00000457352 1529 ntBASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 AL024508.2-201ENST00000607749 1894 ntBASIC19.84■□□□□ 0.77
TRAIPQ9BWF2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 AL031598.1-201ENST00000561511 1773 ntBASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 AC009113.1-201ENST00000570267 2443 ntBASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRAIPQ9BWF2 AC104581.1-202ENST00000635932 2618 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms