Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNN2Q99439 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CNN2Q99439 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.23■□□□□ 0.19
CNN2Q99439 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.23■□□□□ 0.19
CNN2Q99439 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.23■□□□□ 0.19
CNN2Q99439 HOXB1-202ENST00000577092 1414 ntBASIC16.23■□□□□ 0.19
CNN2Q99439 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNN2Q99439 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CNN2Q99439 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNN2Q99439 AC116562.2-201ENST00000507042 360 ntBASIC16.23■□□□□ 0.19
CNN2Q99439 MIR4674-201ENST00000582457 87 ntBASIC16.23■□□□□ 0.19
CNN2Q99439 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.23■□□□□ 0.19
CNN2Q99439 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.23■□□□□ 0.19
CNN2Q99439 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.23■□□□□ 0.19
CNN2Q99439 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.23■□□□□ 0.19
CNN2Q99439 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNN2Q99439 KRT18P55-202ENST00000578578 1546 ntBASIC16.23■□□□□ 0.19
CNN2Q99439 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.23■□□□□ 0.19
CNN2Q99439 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNN2Q99439 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
CNN2Q99439 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CNN2Q99439 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.22■□□□□ 0.19
CNN2Q99439 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNN2Q99439 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.22■□□□□ 0.19
CNN2Q99439 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNN2Q99439 PRORSD1P-202ENST00000563365 2154 ntBASIC16.22■□□□□ 0.19
CNN2Q99439 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNN2Q99439 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 NUDT16P1-203ENST00000513809 620 ntBASIC16.22■□□□□ 0.19
CNN2Q99439 CD99P1-205ENST00000527459 561 ntBASIC16.22■□□□□ 0.19
CNN2Q99439 MIR4651-201ENST00000582622 73 ntBASIC16.22■□□□□ 0.19
CNN2Q99439 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.22■□□□□ 0.19
CNN2Q99439 AL359736.2-201ENST00000621992 437 ntBASIC16.22■□□□□ 0.19
CNN2Q99439 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNN2Q99439 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.22■□□□□ 0.19
CNN2Q99439 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNN2Q99439 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNN2Q99439 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CNN2Q99439 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 KRT8P7-201ENST00000533003 1432 ntBASIC16.21■□□□□ 0.19
CNN2Q99439 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CNN2Q99439 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.21■□□□□ 0.19
CNN2Q99439 KRT18P23-201ENST00000435622 1283 ntBASIC16.21■□□□□ 0.19
CNN2Q99439 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 AC009065.1-201ENST00000564055 1225 ntBASIC16.21■□□□□ 0.19
CNN2Q99439 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNN2Q99439 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CNN2Q99439 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.21■□□□□ 0.19
CNN2Q99439 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNN2Q99439 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.21■□□□□ 0.19
CNN2Q99439 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.21■□□□□ 0.18
CNN2Q99439 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNN2Q99439 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNN2Q99439 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms