Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 AC113347.1-201ENST00000413321 391 ntBASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 RASA4DP-201ENST00000460726 1199 ntBASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 COX11P1-201ENST00000489116 835 ntBASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB18PQ96TA0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 AC211429.1-201ENST00000415277 523 ntBASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 SPDYE15P-201ENST00000424157 909 ntBASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 AC140113.3-201ENST00000605663 199 ntBASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 AC139887.4-201ENST00000607877 719 ntBASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 AC005363.2-201ENST00000618631 242 ntBASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB18PQ96TA0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 AC005521.1-201ENST00000393351 872 ntBASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 LIN28AP1-201ENST00000429574 405 ntBASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 AL137013.1-201ENST00000432946 1228 ntBASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 LINC00602-201ENST00000629776 2065 ntBASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
PCDHB18PQ96TA0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms