Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MS4A4EQ96PG1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 BX664615.1-201ENST00000443558 458 ntBASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 RASA4DP-201ENST00000460726 1199 ntBASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 AL441883.1-201ENST00000566170 1045 ntBASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 AC068880.1-201ENST00000507289 2297 ntBASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MS4A4EQ96PG1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 AL133373.2-201ENST00000623187 2828 ntBASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 AC073508.3-201ENST00000619697 1419 ntBASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 AP000997.3-201ENST00000623333 2250 ntBASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MS4A4EQ96PG1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 AC005521.1-201ENST00000393351 872 ntBASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 AC211429.1-201ENST00000415277 523 ntBASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 YBX1P2-201ENST00000489612 999 ntBASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms