Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 PMS2P1-201ENST00000431037 1228 ntBASIC19.53■□□□□ 0.72
SNX27Q96L92 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.53■□□□□ 0.72
SNX27Q96L92 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX27Q96L92 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX27Q96L92 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.53■□□□□ 0.72
SNX27Q96L92 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 AC092865.5-201ENST00000545435 363 ntBASIC19.53■□□□□ 0.72
SNX27Q96L92 AC005336.2-201ENST00000593183 939 ntBASIC19.53■□□□□ 0.72
SNX27Q96L92 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX27Q96L92 AL732292.2-201ENST00000609649 430 ntBASIC19.53■□□□□ 0.72
SNX27Q96L92 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNX27Q96L92 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX27Q96L92 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX27Q96L92 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX27Q96L92 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SNX27Q96L92 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.52■□□□□ 0.72
SNX27Q96L92 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX27Q96L92 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SNX27Q96L92 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 UNC93B7-201ENST00000509439 705 ntBASIC19.52■□□□□ 0.72
SNX27Q96L92 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 AL121772.3-201ENST00000610840 674 ntBASIC19.52■□□□□ 0.72
SNX27Q96L92 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX27Q96L92 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SNX27Q96L92 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX27Q96L92 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX27Q96L92 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
SNX27Q96L92 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX27Q96L92 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SNX27Q96L92 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX27Q96L92 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.51■□□□□ 0.71
SNX27Q96L92 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.51■□□□□ 0.71
SNX27Q96L92 KRT18P31-201ENST00000506277 1292 ntBASIC19.51■□□□□ 0.71
SNX27Q96L92 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.51■□□□□ 0.71
SNX27Q96L92 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 AC027796.2-201ENST00000575326 344 ntBASIC19.51■□□□□ 0.71
SNX27Q96L92 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 BNIP3P18-201ENST00000593976 575 ntBASIC19.51■□□□□ 0.71
SNX27Q96L92 IFNL4P1-201ENST00000607083 540 ntBASIC19.51■□□□□ 0.71
SNX27Q96L92 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX27Q96L92 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX27Q96L92 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SNX27Q96L92 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX27Q96L92 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX27Q96L92 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SNX27Q96L92 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SNX27Q96L92 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX27Q96L92 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 MINOS1P3-201ENST00000457048 203 ntBASIC19.5■□□□□ 0.71
SNX27Q96L92 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.5■□□□□ 0.71
SNX27Q96L92 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX27Q96L92 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SNX27Q96L92 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX27Q96L92 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms