Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 AC008764.6-201ENST00000595909 2069 ntBASIC15.8■□□□□ 0.12
CPNE2Q96FN4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CPNE2Q96FN4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 AC097488.1-201ENST00000507834 756 ntBASIC15.79■□□□□ 0.12
CPNE2Q96FN4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 ITM2C-210ENST00000620962 501 ntBASIC15.79■□□□□ 0.12
CPNE2Q96FN4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 GPAT2P1-201ENST00000444924 1672 ntBASIC15.79■□□□□ 0.12
CPNE2Q96FN4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE2Q96FN4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 AC009102.3-201ENST00000623118 1491 ntBASIC15.78■□□□□ 0.12
CPNE2Q96FN4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 MIR149-201ENST00000384879 89 ntBASIC15.78■□□□□ 0.12
CPNE2Q96FN4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 MESTP1-201ENST00000404287 994 ntBASIC15.78■□□□□ 0.12
CPNE2Q96FN4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE2Q96FN4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms