Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 AC020916.1-201ENST00000587762 1774 ntBASIC18.51■□□□□ 0.55
RTP4Q96DX8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 AL157888.1-201ENST00000631930 593 ntBASIC18.51■□□□□ 0.55
RTP4Q96DX8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.5■□□□□ 0.55
RTP4Q96DX8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTP4Q96DX8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.5■□□□□ 0.55
RTP4Q96DX8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.5■□□□□ 0.55
RTP4Q96DX8 AC113404.2-201ENST00000507884 177 ntBASIC18.5■□□□□ 0.55
RTP4Q96DX8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.5■□□□□ 0.55
RTP4Q96DX8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 AC141257.4-201ENST00000634557 245 ntBASIC18.5■□□□□ 0.55
RTP4Q96DX8 AC136944.6-201ENST00000634818 245 ntBASIC18.5■□□□□ 0.55
RTP4Q96DX8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.5■□□□□ 0.55
RTP4Q96DX8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RTP4Q96DX8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTP4Q96DX8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.49■□□□□ 0.55
RTP4Q96DX8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTP4Q96DX8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.48■□□□□ 0.55
RTP4Q96DX8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.48■□□□□ 0.55
RTP4Q96DX8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTP4Q96DX8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTP4Q96DX8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTP4Q96DX8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms