Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 TSPY14P-201ENST00000303979 915 ntBASIC18.34■□□□□ 0.53
LRRC39Q96DD0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 AP000525.1-201ENST00000608286 694 ntBASIC18.34■□□□□ 0.53
LRRC39Q96DD0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC39Q96DD0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRRC39Q96DD0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 EGLN1P1-201ENST00000531623 762 ntBASIC18.32■□□□□ 0.52
LRRC39Q96DD0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC39Q96DD0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 AC008550.1-201ENST00000511500 884 ntBASIC18.31■□□□□ 0.52
LRRC39Q96DD0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms