Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 AC091607.1-201ENST00000490318 1060 ntBASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ECHDC3Q96DC8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 AC012615.1-201ENST00000565797 1299 ntBASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 AC011840.4-201ENST00000578471 627 ntBASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ECHDC3Q96DC8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 IGHV3-47-201ENST00000425060 335 ntBASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 AC112698.1-201ENST00000510299 916 ntBASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms