Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 MIR3180-5-201ENST00000583743 153 ntBASIC17.28■□□□□ 0.36
LRRC58Q96CX6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 LINC01126-201ENST00000623515 1646 ntBASIC17.28■□□□□ 0.36
LRRC58Q96CX6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 AL355312.1-201ENST00000407115 2176 ntBASIC17.28■□□□□ 0.36
LRRC58Q96CX6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 AC096733.2-201ENST00000609937 1394 ntBASIC17.28■□□□□ 0.36
LRRC58Q96CX6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 LINC00602-201ENST00000629776 2065 ntBASIC17.27■□□□□ 0.36
LRRC58Q96CX6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC58Q96CX6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC58Q96CX6 AC124067.4-201ENST00000519691 2379 ntBASIC17.26■□□□□ 0.35
LRRC58Q96CX6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC58Q96CX6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 CD99P1-205ENST00000527459 561 ntBASIC17.25■□□□□ 0.35
LRRC58Q96CX6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 AC073648.6-201ENST00000641589 218 ntBASIC17.25■□□□□ 0.35
LRRC58Q96CX6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC58Q96CX6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms