Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 MKNK2P1-201ENST00000437526 628 ntBASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 AC244107.1-201ENST00000442033 332 ntBASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM43Q96BQ3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 HCG4B-203ENST00000450128 991 ntBASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 AD001527.2-201ENST00000622994 785 ntBASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 GPR89P-201ENST00000407924 1495 ntBASIC19.6■□□□□ 0.73
TRIM43Q96BQ3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 VN2R19P-201ENST00000442399 1052 ntBASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 AC093028.1-201ENST00000622998 982 ntBASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM43Q96BQ3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.58■□□□□ 0.73
TRIM43Q96BQ3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM43Q96BQ3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM43Q96BQ3 AC006504.4-201ENST00000592118 1568 ntBASIC19.58■□□□□ 0.73
TRIM43Q96BQ3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM43Q96BQ3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TRIM43Q96BQ3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms