Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 PVRIG2P-201ENST00000435460 978 ntBASIC19.13■□□□□ 0.65
ATP2A3Q93084 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 KRT18P1-202ENST00000452408 1331 ntBASIC19.12■□□□□ 0.65
ATP2A3Q93084 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A3Q93084 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATP2A3Q93084 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 RNF126P1-202ENST00000569893 925 ntBASIC19.11■□□□□ 0.65
ATP2A3Q93084 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A3Q93084 AC005082.1-201ENST00000413042 2259 ntBASIC19.11■□□□□ 0.65
ATP2A3Q93084 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A3Q93084 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms